FastQCFastQC Report
Mon 25 Mar 2013
4.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 4.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 30977771
Filtered Sequences 0
Sequence length 49
%GC 50

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 3719805 12.007981465160936 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 1800491 5.8122032085523525 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 1360235 4.391003471489282 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 1021112 3.2962733180511927 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 721676 2.329657611582189 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 704382 2.2738304831551632 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 651523 2.103195223439414 RNA PCR Primer, Index 1 (100% over 29bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 322500 1.0410690943515595 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 303605 0.9800737438468379 RNA PCR Primer, Index 1 (100% over 28bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 249222 0.8045188273875483 RNA PCR Primer, Index 1 (100% over 27bp)
CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 241434 0.7793782193044168 RNA PCR Primer, Index 1 (100% over 29bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 218170 0.7042792071773014 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 211219 0.6818405365576496 RNA PCR Primer, Index 1 (100% over 28bp)
TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC 200116 0.6459987066209508 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 193269 0.6238957606084699 RNA PCR Primer, Index 1 (100% over 29bp)
CATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCA 185380 0.5984291122818359 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 182663 0.5896583069195004 RNA PCR Primer, Index 1 (100% over 27bp)
CGCGACCTCAGATCAGATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 178553 0.5763907286938108 RNA PCR Primer, Index 1 (100% over 32bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 178453 0.5760679165715312 RNA PCR Primer, Index 1 (100% over 26bp)
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 163470 0.5277009762903857 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 143425 0.4629932863794493 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 139126 0.44911559324265127 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 125039 0.40364104957713065 RNA PCR Primer, Index 1 (100% over 25bp)
AGCTACATCTGGCTACTGGGTCTCTGGAATTCTCGGGTGCCAAGGAACT 119277 0.38504061509138277 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 116257 0.37529168899854026 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 115361 0.37239929238291547 RNA PCR Primer, Index 1 (100% over 25bp)
CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 108909 0.35157145425343866 RNA PCR Primer, Index 1 (100% over 33bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 101273 0.326921520596172 RNA PCR Primer, Index 1 (100% over 25bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 98222 0.31707252274542286 RNA PCR Primer, Index 1 (100% over 27bp)
TGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACG 93756 0.302655733364418 RNA PCR Primer, Index 6 (100% over 34bp)
ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 93639 0.30227804318135093 RNA PCR Primer, Index 1 (100% over 28bp)
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 93218 0.300919004146554 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT 82742 0.267101206216548 RNA PCR Primer, Index 1 (100% over 30bp)
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACGG 76606 0.2472934543934746 RNA PCR Primer, Index 2 (97% over 35bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 74199 0.23952336661020576 RNA PCR Primer, Index 1 (100% over 25bp)
ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC 71597 0.2311237951884918 RNA PCR Primer, Index 1 (100% over 26bp)
ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC 70582 0.2278472521473543 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 68762 0.22197207152186643 RNA PCR Primer, Index 1 (100% over 26bp)
CCTGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 66946 0.21610980338126975 RNA PCR Primer, Index 1 (100% over 32bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 65784 0.21235872652038135 RNA PCR Primer, Index 1 (100% over 27bp)
TACCCATTGCATATCGGAGCTGTGGAATTCTCGGGTGCCAAGGAACTCC 60515 0.19534975579747166 RNA PCR Primer, Index 1 (100% over 27bp)
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 60014 0.19373246706485112 RNA PCR Primer, Index 1 (100% over 26bp)
CAACAGCAGTCGATGGGCTGTTGGAATTCTCGGGTGCCAAGGAACTCCA 59325 0.191508291542345 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGATGAAGCACTGTAGCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 58579 0.18910011311013952 RNA PCR Primer, Index 1 (100% over 29bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 56768 0.18325398557565684 RNA PCR Primer, Index 1 (100% over 28bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 56134 0.18120735672040444 RNA PCR Primer, Index 1 (100% over 27bp)
AGAGGTAAAAAATTGATTTGACTTGGAATTCTCGGGTGCCAAGGAACTC 55048 0.1777016170724485 RNA PCR Primer, Index 1 (100% over 26bp)
AAGCTGCCAGTTGAAGAACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 54840 0.17703016785810702 RNA PCR Primer, Index 1 (100% over 29bp)
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 54695 0.1765620902808017 RNA PCR Primer, Index 1 (100% over 24bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 51030 0.16473102599925604 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 49975 0.16132535810920676 RNA PCR Primer, Index 1 (100% over 26bp)
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 49971 0.16131244562431557 RNA PCR Primer, Index 1 (100% over 26bp)
ATCACATTGCCAGGGATTTTGGAATTCTCGGGTGCCAAGGAACTCCAGT 48149 0.1554308087563821 RNA PCR Primer, Index 1 (100% over 30bp)
CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACGGC 48024 0.15502729360353268 RNA PCR Primer, Index 6 (97% over 36bp)
TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 46502 0.15011409310243787 RNA PCR Primer, Index 1 (100% over 31bp)
ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACG 46144 0.14895842570467707 RNA PCR Primer, Index 6 (100% over 34bp)
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 44465 0.14353841017160338 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 42356 0.1367303025127276 RNA PCR Primer, Index 1 (100% over 25bp)
ATCTGTGATGACTTACATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 41291 0.13329235341045034 RNA PCR Primer, Index 1 (100% over 32bp)
AGAGGTAAAAAATTGATTTGACTGGAATTCTCGGGTGCCAAGGAACTCC 39346 0.12701365763211303 RNA PCR Primer, Index 1 (100% over 27bp)
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCA 38741 0.12506064429232175 No Hit
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 38642 0.124741060291265 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCTACACTCAGCTTGGAATTCTCGGGTGCCAAGGAACTCC 37171 0.11999249397253275 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 36686 0.11842685517947692 RNA PCR Primer, Index 1 (100% over 26bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTTGGAATTCTCGGGTGC 36300 0.11718080038747784 No Hit
AGCTACATCTGGCTACTGGGTCTTGGAATTCTCGGGTGCCAAGGAACTC 35656 0.11510189031999753 RNA PCR Primer, Index 1 (100% over 26bp)
CCCATAAAGTAGAAAGCACTACTGGAATTCTCGGGTGCCAAGGAACTCC 35637 0.1150405560167644 RNA PCR Primer, Index 1 (100% over 27bp)
AAGCTGCCAGTTGAAGAACTGTATGGAATTCTCGGGTGCCAAGGAACTC 35425 0.11435619431753176 RNA PCR Primer, Index 1 (100% over 26bp)
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCC 35313 0.11399464474057866 No Hit
TCGACCGGACCTCGACCGGCTTGGAATTCTCGGGTGCCAAGGAACTCCA 35208 0.11365569201218513 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCTTATCAGACTGATGTTTGGAATTCTCGGGTGCCAAGGAACTCCAG 34725 0.11209650946157489 RNA PCR Primer, Index 1 (100% over 29bp)
ATTCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAG 34716 0.11206745637056972 RNA PCR Primer, Index 1 (100% over 29bp)
CGACACAAGGGTTTGTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 34250 0.110563151880747 RNA PCR Primer, Index 1 (100% over 33bp)
TTCACAGTGGCTAAGTTCTGCTGGAATTCTCGGGTGCCAAGGAACTCCA 33679 0.10871989466253076 RNA PCR Primer, Index 1 (100% over 28bp)
TTCAAGTAATCCAGGATAGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 33665 0.10867470096541161 RNA PCR Primer, Index 1 (100% over 26bp)
CACTAGATTGAGAGCTCCTGGAATGGAATTCTCGGGTGCCAAGGAACTC 33278 0.10742541805218975 RNA PCR Primer, Index 1 (100% over 26bp)
GACACAAGGGTTTGTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACG 33276 0.10741896180974417 RNA PCR Primer, Index 6 (100% over 34bp)
TGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 31931 0.10307713876508415 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCTCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 31799 0.10265102676367516 RNA PCR Primer, Index 1 (100% over 25bp)
AATTAATGTGAATTGCAGGACATGGAATTCTCGGGTGCCAAGGAACTCC 31720 0.10239600518707431 RNA PCR Primer, Index 1 (100% over 27bp)
AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 31393 0.10134040954722016 RNA PCR Primer, Index 1 (100% over 27bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
TTCTC 31291385 29.151653 433.43503 28
AATTC 31773670 27.805656 408.08047 26
TGCCA 33701080 27.74575 381.27148 36
ATTCT 31313465 27.05406 402.69473 27
TCTCG 30945235 25.15255 377.96255 29
GAACT 32252645 24.625263 352.40018 43
GCCAA 29033350 24.21108 386.14786 37
CCAAG 28945265 24.137629 386.16138 38
AACTC 24574235 23.488064 440.56622 44
GAATT 31963525 22.3444 326.70636 25
CTCGG 30873735 21.894104 329.53986 30
GTGCC 29676705 21.04523 328.76703 35
ACTCC 20353590 20.977095 474.19778 45
GGAAT 31595660 19.270424 284.84225 24
CAAGG 28752280 19.153038 308.5559 39
TGGAA 31316740 19.100307 284.7946 23
GGAAC 27799490 18.518345 307.59097 42
AAGGA 28578575 17.655048 286.36044 40
AGGAA 28192170 17.416336 286.38373 41
TCGGG 30680100 17.379732 263.2683 31
CGGGT 30617830 17.344456 262.92715 32
GGTGC 30263660 17.143826 262.93176 34
GGGTG 30533065 13.816721 210.24901 33
CTCCA 10168915 10.480426 117.85316 45
TTGGA 15114090 9.10084 188.48541 22
CCAGT 9752110 8.02881 154.91301 7
TCCAG 8500100 6.9980435 78.25954 45
TGTTG 9961775 5.9220457 139.03818 17
GTTGA 9314225 5.608493 131.5367 18
GACTG 7759905 5.103373 154.75244 11
TCAGA 6536115 4.990399 188.4326 8
TGATG 7974345 4.801694 141.98695 14
TTATC 5529700 4.777524 203.49477 5
TATCA 5434980 4.7562394 206.08301 6
ACTGA 6089880 4.649693 180.10442 12
CTTAT 5318995 4.5954804 203.14372 4
CAGAC 5483850 4.573015 195.60329 9
CTGAT 5964955 4.4963317 177.89479 13
AGCTT 5827715 4.392881 177.07019 2
ATCAG 5718960 4.3664913 179.27151 7
AGACT 5618970 4.290148 179.38141 10
TAGCT 5490790 4.1389103 176.99065 1
CAGTC 4907325 4.0401497 31.732143 44
GCTTA 5334480 4.0210843 177.26181 3
ATGGA 6518415 3.9756289 67.93579 22
CTGGA 5979545 3.9325032 47.16505 23
AGAAC 5065200 3.9172072 146.78981 15
CTGCC 4381410 3.889588 168.08434 4
AACTG 5036040 3.8450742 142.869 17
CTTGG 5869560 3.8110275 41.434414 23
ATGTT 5433580 3.7500384 162.5373 16
CTGTT 4941635 3.6775398 138.80083 19
ACTGT 4787520 3.6087914 140.45131 18
AAGCT 4717650 3.60198 144.6766 1
AAGAA 4916605 3.5262108 136.35034 14
AGTCA 4466115 3.40993 29.479513 45
CAGTT 4502055 3.3936102 141.93652 8
GATGT 5615085 3.3810828 142.0047 15
AGCTG 5065575 3.331422 124.30424 2
GCCAG 4613740 3.314023 136.29057 6
TTGAA 4573440 3.1971064 131.93051 11
AGTTG 5126445 3.0868516 113.32116 9
GCTGC 4327360 3.0687463 134.10869 3
GTTGG 5839695 3.0288305 98.15399 21
GTGGA 5659125 2.9730248 28.160856 20
TGAAG 4619755 2.8176222 115.93299 12
GAAGA 4444380 2.745614 117.259125 13
TTGAC 3608270 2.7198827 98.17228 19
ACTTG 3499255 2.6377082 37.485023 22
TGACT 3365590 2.5369527 85.84337 20
GTCAC 3043570 2.5057397 25.721914 45
ACTGG 3339105 2.1959934 43.210743 22
TTTGG 3691645 2.1945977 40.10512 21
TCACG 2435050 2.0047512 24.98283 45
GATGG 3337085 1.7531396 49.498154 21
GTAGT 2780065 1.673996 49.24419 5
TCACA 1705570 1.6301847 62.47773 2
GCTTG 2505410 1.6267291 33.626038 20
AGTAG 2631205 1.6047912 49.345 7
GACTT 2128800 1.6046709 36.96012 21
TTGAT 2243075 1.5480801 59.523617 19
GTTTG 2584045 1.5361552 35.9946 20
GGCTA 2310565 1.5195644 37.521656 9
AATCC 1524010 1.4566495 38.488262 8
TAGTA 1999490 1.3977623 57.067356 6
GCACT 1661450 1.3678544 24.009487 5
GTAGA 2202875 1.3435495 31.829426 8
TAGTT 1927840 1.3305176 43.78206 18
TTCAA 1500910 1.3134707 41.43489 1
CACGG 1820965 1.3079889 16.567665 45
AGTGG 2467385 1.2962421 30.27728 6
AGGTA 2117060 1.2912103 52.129173 3
CACAG 1537585 1.2822013 49.221798 3
ACAGT 1673280 1.2775686 43.733276 4
TGTGG 2462445 1.2771777 13.657465 20
AAGTA 1792060 1.2689109 33.79842 4
GGCTT 1928615 1.2522238 34.12244 19
TTCAC 1318940 1.2445945 53.89476 1
CGTGG 2185585 1.238095 18.79793 19
GCTGT 1881960 1.2219315 12.1019745 20
TTGTA 1770445 1.22189 45.546635 13
CCTGG 1679335 1.1909001 5.0531726 23
GGTAG 2253705 1.1839852 42.725616 4
GCTAA 1544905 1.1795526 45.840973 10
TGGCT 1816060 1.1791435 37.32335 8
GTTCC 1428165 1.1608245 32.14388 15
CAGTG 1753340 1.1531003 37.983624 5
TGTAT 1666390 1.1500753 43.322613 14
TGAGG 2163080 1.1363753 42.054688 1
AGGCT 1718750 1.1303519 27.803677 18
CCGTG 1586000 1.1247116 22.671862 18
AGTTT 1623870 1.1207298 31.972296 19
GAGGT 2130875 1.1194564 44.861374 2
CTAAG 1446495 1.1044155 43.688995 11
ATTGT 1584225 1.0933683 35.751354 12
ATAGT 1559535 1.0902075 44.673367 17
CACTT 1154680 1.0895935 26.690632 6
TCCCG 1223035 1.0857468 21.443478 12
CTGTG 1667880 1.0829324 11.344013 21
AGATT 1548855 1.0827415 35.97494 10
GATTG 1772545 1.0673251 31.525248 11
AGTTC 1399830 1.0551797 41.67113 14
CAGGA 1571215 1.0466489 32.07802 12
CATGG 1568485 1.0315287 7.9575415 23
CAAGT 1350825 1.0313704 36.29396 3
TATAG 1474770 1.0309517 42.858047 16
CCAGG 1433510 1.029682 29.296904 11
AAGTT 1471680 1.0287918 39.391838 13
GTATA 1470970 1.0282954 43.028564 15
TAAGT 1458065 1.019274 40.241695 12
GCCTG 1432140 1.0156019 16.673714 17
TAGAT 1414700 0.98895925 35.863464 9
AAGCA 1277245 0.9877664 13.499409 15
ATTGC 1283235 0.96729136 22.884232 2
ATAGG 1581275 0.96443117 31.320187 16
GTAAT 1362730 0.9526291 33.3469 6
ATCCA 987670 0.9440154 38.27263 9
AAAGC 1214485 0.93923044 13.446179 14
CCTGT 1118380 0.9090287 18.765423 18
ACGGC 1240295 0.8908968 12.09978 45
AGGAT 1451380 0.88520724 29.063396 13
TCAAG 1158505 0.8845319 36.13643 2
TAATC 1005070 0.8795531 35.236702 7
AGTAA 1213620 0.85933244 33.626408 5
TAGGC 1292380 0.8499456 27.594063 17
GTGGC 1490440 0.8443078 32.744507 7
AGCAC 1004090 0.8373166 13.520767 15
TCCTT 890320 0.8294392 16.353893 11
TTGCA 1096960 0.8268789 22.83375 3
CCCAA 786115 0.82064414 19.846148 10
GACCT 995815 0.81984407 10.977024 4
TTCCG 1002360 0.81472665 28.726225 16
AACAT 906060 0.8031324 17.099285 5
TTCTG 1074520 0.7996524 12.016489 16
CCATA 833365 0.7965306 15.874831 2
ACATC 829595 0.7929273 18.562096 6
TCCGT 975090 0.79256135 26.220255 17
ATCCC 768805 0.79235625 27.243156 8
GCTAC 953480 0.7849901 10.493843 2
CGGCT 1095040 0.77654743 7.6888633 45
CTACT 814440 0.768532 9.833123 17
GGATA 1249970 0.7623658 28.979694 14
TCTGG 1168230 0.75851625 6.84391 8
GATAG 1233480 0.7523084 29.563274 15
TTTTG 1071830 0.73031646 12.290259 14
TGCAC 882310 0.7263967 24.635578 4
TTCCC 713365 0.72585803 5.6206717 8
TGAAT 1005430 0.7028552 11.161076 9
GGCCT 989975 0.7020406 17.02511 16
CTGTC 858625 0.6978977 14.783081 12
CCCGG 891240 0.6902941 18.44448 13
CTACA 721090 0.68921816 12.226427 3
AATGG 1127945 0.687942 5.51626 23
AAAGT 971400 0.6878228 11.838849 6
TGCTG 1056980 0.6862831 8.714696 16
ACATT 773245 0.6766793 15.219105 2
CTGAA 886165 0.6765972 10.34484 8
GTCCC 757285 0.6722782 21.049318 11
TCCCA 649290 0.6691801 17.66548 9
CTGTA 883855 0.66624224 10.039489 19
CATTG 879445 0.66291803 9.722982 5
CTCCT 650700 0.6620956 17.788227 10
CAACG 790495 0.65919846 14.485569 1
AGCAG 984125 0.6555647 11.628767 16
CCAAA 675490 0.65395916 16.57904 11
CACTA 683850 0.6536242 10.156501 15
CCGGC 839815 0.65046376 18.441942 14
TATGG 1076300 0.6480862 8.760104 22
TAGAA 909175 0.6437629 12.912285 10
CCCAT 623500 0.64260006 16.864674 1
TTGTC 858265 0.63871646 20.961666 9
TATTG 917095 0.632942 17.180883 1
CAGAA 814585 0.629965 17.388363 15
ATTCC 667250 0.6296387 12.117362 12
GGACT 956265 0.62889653 15.166074 4
CAAAG 808055 0.624915 16.169243 1
CGGCC 802635 0.62166667 18.489502 15
AGAAA 863805 0.61952466 11.86536 11
ACCAC 592725 0.6187597 7.091125 2
CTTTT 723835 0.61741406 15.177317 13
CATAA 694050 0.6152066 14.48554 3
CTTGT 822885 0.6123869 20.940577 8
ATAAA 727150 0.5977466 13.461166 4
GGGCT 1040500 0.5894247 9.813747 18
TTGTG 984510 0.5852685 9.133902 19
GCAGC 812975 0.5839552 12.353588 17
TCGGT 898310 0.5832607 11.2984915 15
TGAGA 954475 0.5821413 8.200091 2
TCTCC 568775 0.5787358 17.970861 9
CAGAT 753755 0.57550055 9.560192 9
TGTCC 707375 0.57496035 18.588497 10
ACATG 751275 0.5736071 8.657019 22
CGACC 637175 0.5729448 11.21107 3
AAAGA 794225 0.5696217 12.776909 2
AGGTT 942230 0.56735694 8.112536 10
ACTAC 584065 0.5582496 9.916709 16
CTCAG 677170 0.557507 10.312028 7
GAAAG 896245 0.5536751 10.352367 12
CACCA 529615 0.55287766 5.9509096 1
GTAAA 775835 0.54934835 13.681932 2
TTTGT 805615 0.5489246 12.470287 12
AAACA 606975 0.544961 17.4397 4
ATACC 569840 0.5446533 7.078421 19
GTGCT 827380 0.5372068 8.66259 15
ATTCA 612215 0.5357593 15.162396 4
TAAAG 755545 0.53498155 11.581638 5
TAGGT 884615 0.5326645 7.9426985 9
ACCTC 515275 0.53105974 13.803206 5
CTCTG 649865 0.52821577 5.118073 22
CCTTT 564110 0.5255357 16.429749 12
GAATC 682305 0.52094764 13.471405 6
GGTTT 876155 0.520854 5.832358 20
ATCTG 686835 0.51773024 7.9288406 7
CATCC 499595 0.51489943 19.700817 7
GCCCA 564970 0.5080185 6.847427 11
TTCCA 537055 0.5067825 11.999778 13
TCCAT 536470 0.5062305 12.284663 14
TGTAA 720580 0.5037282 13.494533 1
TAAAC 563895 0.49983704 17.261208 3
CGGAA 746710 0.49741325 11.707452 4
CAGCT 602040 0.49565324 15.751728 18
TACTG 651065 0.49076712 7.6216536 14
CATTC 514410 0.48541394 16.613523 3
AGAAT 679290 0.48098734 12.650041 4
GTCAG 729965 0.48006824 14.886626 13
TGGAC 728660 0.47920996 14.943556 3
CAAAA 533290 0.47880435 15.84094 12
TACAT 539700 0.47230023 11.0949745 4
ATCAC 491185 0.46947482 8.218206 1
AACGC 561885 0.46855924 13.49633 8
CATCT 490905 0.46323386 9.478715 6
ACGGA 691795 0.46083218 12.023472 3
AAAAG 641570 0.46013677 12.593869 13
TCGCT 560780 0.45580673 6.624698 11
CCTCA 439905 0.45338088 13.005067 6
TGACA 584140 0.44599757 8.03909 20
GTTGT 744875 0.44281104 8.823183 18
TCAAC 460355 0.44000754 15.400551 6
AATTG 614475 0.42955452 5.4477525 11
GAAGG 806900 0.42937168 11.370811 17
CAGCA 513905 0.42854843 9.317105 4
GACAT 560970 0.428307 8.2572565 21
CGCTG 598930 0.4247311 11.29586 10
GAGTC 639225 0.42039222 14.854081 11
GTCGG 740540 0.4195028 9.957219 14
CCCCG 430835 0.41773626 9.17381 10
TGGGC 735265 0.41651455 10.297936 17
GATCA 545100 0.4161901 9.51726 11
GTCGC 586490 0.4159093 5.93823 10
CACAT 432290 0.41318303 8.097054 3
AGACC 492265 0.41050267 6.818906 4
GTTCT 547830 0.40769228 11.872879 15
AGAAG 659265 0.4072755 13.806681 16
CGACT 486580 0.4005962 9.952227 13
ATCCT 423160 0.39930746 9.552576 8
CGGTG 701960 0.39764786 10.082854 16
TTGAG 656305 0.3951893 7.7948394 1
TCCCC 352235 0.39144784 10.422286 9
CTGGC 545795 0.38705045 7.4221096 9
AGATG 631405 0.38509852 5.5962815 15
CATAG 502785 0.38388214 11.816106 16
TGGAG 723050 0.37985474 11.947254 9
GGTCT 584630 0.37959248 6.366002 19
TCTGT 507200 0.37745568 7.764259 17
GTAGG 718025 0.37721485 7.2978373 8
TGTTT 546000 0.37202993 7.1206093 19
GAAGC 557890 0.3716327 8.630106 19
AACGG 551975 0.3676925 11.980607 2
GATTT 532250 0.36733755 8.782563 15
GTTAT 531385 0.36674055 5.694064 20
GGAGT 689905 0.362442 11.914168 10
TGAGT 600605 0.36164993 9.041754 19
AGATC 471385 0.35990784 9.400652 10
GAGAA 579625 0.35807616 8.155007 3
GGTTG 687910 0.35679308 7.026673 11
CTGGG 628280 0.35590947 5.6839976 16
ACGCT 432075 0.35572284 13.014336 9
TCTCT 380930 0.3548817 6.4114313 21
TACAG 464150 0.35438386 5.229435 11
GGTGA 671235 0.35263374 8.265156 17
TACCC 341455 0.35191497 5.103893 1
CCGAC 379440 0.3411907 8.927987 12
GGATT 563685 0.33941883 5.4210205 14
TACTT 392295 0.33893317 7.7194867 18
ACTAG 439680 0.33570075 6.0535517 1
AAGGC 497405 0.33134127 9.701604 18
CTAGA 429620 0.3280198 6.0299683 2
GTCTC 395600 0.32154703 5.946329 20
TGTCG 492515 0.3197834 11.233018 13
TTGGG 614285 0.31860656 9.50073 16
AGCCC 352965 0.3173845 7.1018586 10
AGCTA 405745 0.30979094 9.670668 1
TTATG 447995 0.30918813 5.7346616 21
GCGAC 424675 0.30504164 8.823834 2
CCCGA 337580 0.30355042 8.521058 11
TAATT 372050 0.29810244 5.8385725 7
TGTGC 456945 0.2966883 8.544881 14
GTGAG 562200 0.2953521 7.8157673 18
TGGGT 562565 0.29178137 5.2026644 17
GAGTT 481135 0.28971195 6.010364 20
GGAAG 531675 0.28291756 7.5075703 18
CGCGA 380545 0.2733433 8.858001 1
AGCAT 340100 0.25967023 5.472076 4
AAATA 314060 0.25817 5.2849226 12
GCATT 338945 0.2554938 5.212537 5
TAGAC 334400 0.25531822 6.007141 3
GTACA 330925 0.252665 5.2263436 10
TGTAC 321480 0.24232885 5.1754065 9
AAGAT 331170 0.23449276 5.4218984 16
GGGTC 413375 0.23416959 5.5647335 18
TTCAG 303220 0.22856459 5.7460995 10
TTGCC 273790 0.22253881 6.8960037 7
CTAGC 266200 0.21915968 6.2036605 8
TAGCA 286545 0.21878038 7.5593457 1
TAGCC 264190 0.21750487 6.276621 9
ACCTA 221240 0.2114613 7.197214 6
CCTAG 229175 0.18867739 6.190513 7